BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E01SP1|AL426370
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig838 838 0.0
>3x_Contig838
Length = 3732
Score = 838 bits (417), Expect = 0.0
Identities = 426/435 (97%)
Strand = Plus / Plus
Query: 325 aacgcaggacaattatgaggggggggactattagagacctgatggccatggaaaatgtga 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aacgcaggacaattatgaggggggggactattagagacctgatggccatggaaaatgtga 69
Query: 385 gtatgtcgttatatatgtmtcatcagcccggtatatatgcgtatatatgtgtaccactgc 444
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gtatgtcgttatatatgtatcatcagcccggtatatatgcgtatatatgtgtaccactgc 129
Query: 445 catatatatacatatamhtmtmtygacgcgatgcctcgtgactcagttacccggataaga 504
|||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||
Sbjct: 130 catatatatacatataaatatattgacgcgatgcctcgtgactcagttacccggataaga 189
Query: 505 gtttggtattccgggtaacgtccaattgtggctcgtgaacttttcccattgcmaaamtat 564
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 190 gtttggtattccgggtaacgtccaattgtggctcgtgaacttttcccattgcaaaaatat 249
Query: 565 tagtatgtggtgtatgggttagtttcaccagcmaaacccaccctctaatctcatctcatc 624
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 250 tagtatgtggtgtatgggttagtttcaccagcaaaacccaccctctaatctcatctcatc 309
Query: 625 tcatctcatcccgtcactacacccagttctttccctaacgacgtgcagaatcataggtct 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcatctcatcccgtcactacacccagttctttccctaacgacgtgcagaatcataggtct 369
Query: 685 attctagctctgctcagttaccactcggtaccaaagcgataccatttcagaaatccgctt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 attctagctctgctcagttaccactcggtaccaaagcgataccatttcagaaatccgctt 429
Query: 745 agtagcccttgaggc 759
|||||||||||||||
Sbjct: 430 agtagcccttgaggc 444
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5730
Number of Sequences: 1807
Number of extensions: 5730
Number of successful extensions: 669
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)